Cohesin_Residence_Time

This is a repository to analyse inversed fluorescence recovery after photobleaching (iFRAP) data in order to estimate the residence time of cohesin on DNA.

Repository Overview

  • docs: Contains all project documentation.

  • infrastructure: Contains detailed installation instructions for all requried tools.

  • ipa: Contains all image-processing-and-analysis (ipa) scripts which are used for this project to generate final results.

  • runs: Contains all config files which were used as inputs to the scripts in ipa.

  • notebooks: Contains all analysis notebooks with the results from the runs.

Setup

Detailed install instructions can be found in infrastructure/README.md.

Example

An example on how to use this repository can be found in the examples.

This project was generated with the faim-ipa-project copier template.